Particle Tracking in Microscopy Images Leila Muresan (Johannes Kepler Univ. Linz): Abstract: A frequent task in microscopy image processing is tracking of undistinguishable spots in a sequence of images. The problem can be divided into two parts: spot detection and data association, the former strongly influencing the outcome of the latter. The spot detection phase is followed by a fitting process, in order to achieve sub-pixel resolution. The low signal to noise ratio of the images may result in poor quality of detection and fitting, respectively. The data association phase is implemented based on three methods: linear assignment problem, greedy matching and the IPAN method. The IPAN method proved to be the most robust to missed spots and overdetection. The necessity of establishing a quality measure for the detected trajectories, as well as for the tracking process itself, is also discussed.