I am a Full Professor in the Department of Cybernetics of the Faculty of Electrical Engineering of the Czech Technical University. I am a head of a small Biomedical Imaging Algorithms (BIA) group. My research mainly involves algorithms for medical and biological image processing. I am always looking for new collaborations and new projects, so if you have some interesting image data you need to analyze, feel free to contact me. I am a member of the Scientific Council of the FEE CTU, the Scientific Council of FI Masaryk University, and the Scientific Council of the Charles University. I am a head of the master study programme Medical electronics and bioinformatics and of the Phd programme Bioengineering.
News and messages
- The diploma thesis of Lucie Borovičková was awarded the price at a student conference Trends in the development of ultrasound imaging systems.
- Our article Tichy et al: Automatic caries detection in bitewing radiographs: part II—-experimental evaluation. was accepted to Clinical Oral Investigation. (23-Jan-2024)
- Our article Kunt et al: Automatic caries detection in bitewing radiographs: part I—-deep learning. was accepted to Clinical Oral Investigation. (16-Nov-2023)
- Our article Chalupský et al: Deep learning for laser beam imprinting was accepted to Optics Express journal. (11-May-2023)
- Our article Černý et al: Fully automated pipeline for pituitary adenoma segmentation: A Convolutional Neural Network-based model on sparsely annotated MRI. was accepted to Neurosurgical Review journal. (11-May-2023)
- Our article Baručić et al: Characterization of drug effects from phase-contrast images was accepted to the Computers in Medicine and Biology journal. (7-Oct-2022)
- I am looking for new PhD students, post-docs, or more senior collaborators for various projects combining image analysis and machine learning for biology and medicine. Ukrainian scholars are welcome to apply; for Ukrainian students, paid internships may also be available. If you are interested, please send me your CV, recommendation letters, sample publications, study result reports and other relevant documents. (20-Feb-2022)
- Our article Mertanová at al: Learning to segment cell nuclei in phase-contrast microscopy from fluorescence images for drug discovery. was accepted to the SPIE Medical Imaging 2022 conference. (20-Feb-2022)
- Our articles Kostelanský at al: Differentiating between stable and progressive carotid atherosclerotic plaques from in-vivo ultrasound images using texture descriptors, Kaushik et al: Geodesic ray-tracing in white matter fiber crossing region using decomposition of 4th order tensor and Baručić et al: Automatic evaluation of human oocyte developmental potential from microscopy images have been accepted to the SIPAIM 2021 conference. Congratulations! (2-Sep-2021)
I am also on Twitter as @JanKybic.
